RNU6-1234P

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNU6-1234P RNA differs between tumor and matched normal tissue in 2 of 18 cancer types tested, making tumor–normal expression one of RNU6-1234P’s most consistent transcriptional readouts.

The strongest signal is observed in esophageal carcinoma (ESCA), where RNU6-1234P RNA is repressed in tumor relative to normal tissue. In most cancer types RNU6-1234P is over-expressed in tumor, although a few such as ESCA and LUSC show the opposite, repressed pattern.

ESCA and LUSC are the cancer types where RNU6-1234P tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RNU6-1234P RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
ESCAFemaleAll−0.636.0061view →
LUSCAllAll−0.099.0261view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 2 strongest of 2 lineages.

RNU6-1234P–ESCA

Tumor-vs-normal expression box plot for RNU6-1234P RNA in ESCA.

Open the ESCA breakdown →

Exploration