RNU6-1223P

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNU6-1223P RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of RNU6-1223P’s most consistent transcriptional readouts.

The strongest signal is observed in bladder urothelial carcinoma (BLCA), where RNU6-1223P RNA is more highly expressed in tumor relative to normal tissue. In most cancer types RNU6-1223P is over-expressed in tumor.

BLCA, READ, and COAD are the cancer types where RNU6-1223P tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RNU6-1223P RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
BLCAAllAll+0.709.0056view →
READAllIII,IV+2.145.0015view →
COADMaleAll+1.076<.0015view →
LUSCAllAll+0.687<.0015view →
LIHCAllAll+0.201<.0015view →
CHOLAllAll+1.477.0014view →
LUADAllAll+0.380.0104view →
STADAllII,III,IV+0.450.0243view →
PRADAllAll+0.410.0022view →
ESCAAllAll+0.695.0331view →
HNSCAllII,III,IV+0.221.0451view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

RNU6-1223P–BLCA

Tumor-vs-normal expression box plot for RNU6-1223P RNA in BLCA.

Open the BLCA breakdown →

Exploration