RNU6-1099P

associated omics data
RNA, U6 small nuclear 1099, pseudogeneGenealiases: []

Q-omics provides the consensus-scored RNU6-1099P profile across patient tissues and cancer cell-line models. RNU6-1099P expression is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, RNU6-1099P is differentially expressed in 12, with the highest sampling consensus in LUSC. Additionally, RNU6-1099P RNA expression shows 14,061 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight HNSC, LUSC, and THYM as cancer lineages where RNU6-1099P shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU6-1099P survival associations across molecular data types. RNU6-1099P RNA expression shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU6-1099P data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier20HNSC (39)view →
This table ranks reproducible RNU6-1099P RNA expression–survival associations across cancer types. High RNU6-1099P expression shows unfavorable associations in UVM, UCEC, MESO, ACC and LGG, but favorable associations in HNSC. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .002). Together, the overview and detailed table identify HNSC as the clearest survival context for RNU6-1099P RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSMedianIV0.8190.647.00239view →
UVMDFSQuartileIII,IV0.1110.808<.00130view →
UCECDFSTertileAll0.7900.887.00328view →
MESODFSTertileAll0.3880.769.00624view →
ACCDFSMedianAll0.4530.753.00622view →
LGGOSTertileAll0.7410.900.00418view →
Pink = unfavorable, green = favorable. all 20 lineages →

RNU6-1099P-HNSC (OS)

Kaplan–Meier survival curve for RNU6-1099P RNA expression in HNSC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes RNU6-1099P tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 12. The strongest signals are observed in LUSC for RNA.
RNU6-1099P data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot12LUSC (8)view →
This table ranks reproducible tumor–normal expression differences for RNU6-1099P. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU6-1099P shows higher tumor expression in LUSC, HNSC, KIRC, UCEC, STAD and BRCA. The LUSC box plot shows higher RNU6-1099P RNA expression in tumor versus normal tissue (log2 FC = +1.114, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LUSCFemaleAll+1.114<.0018view →
HNSCAllAll+0.294.0017view →
KIRCMaleII,III,IV+0.505<.0015view →
UCECAllIV+1.270.0074view →
STADAllII,III,IV+0.935.0034view →
BRCAAllII,III,IV+0.369.0054view →
Green = repressed in tumor. all 12 lineages →

RNU6-1099P-LUSC

Tumor-vs-normal expression box plot for RNU6-1099P in LUSC.

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Cross-omics associations

This table shows molecular features associated with RNU6-1099P in patient tissues and cancer cell lines. In patient samples, RNU6-1099P shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA14,061THYM (4072)view →
Protein (mass-spec)9,408GBM (3274)view →