RNU6-1048P

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNU6-1048P RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of RNU6-1048P’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where RNU6-1048P RNA is more highly expressed in tumor relative to normal tissue. In most cancer types RNU6-1048P is over-expressed in tumor, although a few such as THCA and UCEC show the opposite, repressed pattern.

COAD, THCA, and BLCA are the cancer types where RNU6-1048P tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RNU6-1048P RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADMaleII,III,IV+1.010<.0016view →
THCAAllAll−0.363.0064view →
BLCAFemaleIV+1.306.0063view →
HNSCAllII,III,IV+0.364.0053view →
ESCAFemaleAll+1.383.0012view →
CHOLAllAll+1.165.0202view →
UCECAllAll−0.566.0252view →
STADAllII,III,IV+0.524.0362view →
PRADAllAll+0.354.0132view →
LUSCAllAll+0.350.0271view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

Exploration