RNU5F-4P

Across TCGA patient cohorts, RNU5F-4P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,322 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU5F-4P-associated GO terms across cancer lineages are tRNA metabolic process, Protein modification by small protein removal, and Methylation. Each is linked with RNU5F-4P in more than 17 cancer types. Because this analysis shows association rather than direction, both RNU5F-4P-to-partner and partner-to-RNU5F-4P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, tRNA metabolic process grouped by RNU5F-4P-low versus RNU5F-4P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU5F-4P→partner) and Y-score (partner→RNU5F-4P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	tRNA metabolic process →	+0.054	+0.371	<.001	<.001	3	18
UVM	Protein modification by small protein removal →	+0.063	+0.208	<.001	.001	3	17
STAD	Methylation →	+0.048	+0.357	<.001	<.001	3	17
STAD	ERAD pathway →	+0.053	+0.374	<.001	<.001	3	17
DLBC	tRNA processing →	+0.053	+0.793	<.001	<.001	3	17
STAD	Positive regulation of translation →	+0.050	+0.326	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,322 associations by consensus.

tRNA metabolic process by RNU5F-4P expression — STAD

Explore this box plot interactively →