RNU4ATAC5P

Across TCGA patient cohorts, RNU4ATAC5P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,145 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNU4ATAC5P-associated GO terms across cancer lineages are Carbohydrate biosynthetic process, Obsolete positive regulation of mitochondrion organization, and Lipid homeostasis. Each is linked with RNU4ATAC5P in more than 8 cancer types. Because this analysis shows association rather than direction, both RNU4ATAC5P-to-partner and partner-to-RNU4ATAC5P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Carbohydrate biosynthetic process grouped by RNU4ATAC5P-low versus RNU4ATAC5P-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU4ATAC5P→partner) and Y-score (partner→RNU4ATAC5P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Carbohydrate biosynthetic process →	+0.125	+0.092	<.001	.001	3	9
ESCA	Obsolete positive regulation of mitochondrion organization →	+0.154	+0.147	<.001	.005	3	8
STAD	Lipid homeostasis →	+0.088	+0.131	<.001	<.001	3	8
ESCA	Vesicle-mediated transport between endosomal compartments →	+0.187	+0.154	<.001	.003	3	7
ESCA	Vesicle-mediated transport in synapse →	+0.115	+0.182	<.001	.001	3	7
ESCA	Regulation of peptide transport →	+0.083	+0.118	<.001	.002	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,145 associations by consensus.

Carbohydrate biosynthetic process by RNU4ATAC5P expression — ESCA

Explore this box plot interactively →