RNU4ATAC12P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU4ATAC12P RNA expression is significantly associated with the protein abundance of many other proteins, with 9,022 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RNU4ATAC12P-associated proteins across cancer lineages are SART3, ZCCHC3, and ZFR. Each is linked with RNU4ATAC12P in more than 3 cancer types. Because this analysis shows association rather than direction, both RNU4ATAC12P-to-partner and partner-to-RNU4ATAC12P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNU4ATAC12P versus SART3 in GBM, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU4ATAC12P→partner) and Y-score (partner→RNU4ATAC12P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSART3 →+0.233+0.561<.001<.00134
GBMZCCHC3 →+0.480+0.603.002.00133
GBMZFR →+0.266+0.646<.001<.00133
GBMZMYM4_S1241 →+0.428+0.533.002.00433
OVTNKS1BP1_S1297 →-0.563-0.692<.001.00133
GBMPOLR2E →+0.311+0.806<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,022 associations by consensus.

RNU4ATAC12P vs SART3 — GBM

Per-sample scatter of RNU4ATAC12P vs SART3 in GBM (Pearson r = 0.34).

Explore this scatter interactively →

Exploration