RNU1-4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNU1-4 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,224 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RNU1-4-associated proteins across cancer lineages are THRAP3_T941, FOXP4_S554, and PALM2AKAP2_S135. Each is linked with RNU1-4 in more than 2 cancer types. Because this analysis shows association rather than direction, both RNU1-4-to-partner and partner-to-RNU1-4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNU1-4→partner) and Y-score (partner→RNU1-4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACTHRAP3_T941 →-0.651-0.976<.001<.00133
CCRCCFOXP4_S554 →+0.486+0.974<.001<.00133
LUADPALM2AKAP2_S135 →+0.451+0.806.001<.00132
PDACSECTM1 →+1.363+1.184.003.00132
PDACSVIL_S238 →-0.540-1.006<.001<.00132
PDACSYNM_S1181 →+0.900+1.216<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,224 associations by consensus.

Exploration