RNF34

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF34 mutation is significantly associated with the total protein of many other genes, with 19 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF34-associated genes across cancer lineages are Caspase-7-cleavedD198, EGFR_pY1068, and IGFBP2. Each is linked with RNF34 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF34-to-partner and partner-to-RNF34 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by RNF34-low versus RNF34-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF34→partner) and Y-score (partner→RNF34) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.720+2.341.005.01932
UCECEGFR_pY1068 →-0.255-2.115.020.01931
UCECIGFBP2 →-0.794-2.115.005.01931
UCECJNK_pT183_Y185 →-0.189-2.321.010.03431
UCECJNK2 →+0.197+2.115.023.01931
UCECKu80 →+0.306+2.820.003.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

Caspase-7-cleavedD198 by RNF34 expression — UCEC

Box plot of Caspase-7-cleavedD198 in RNF34-low vs RNF34-high samples in UCEC.

Explore this box plot interactively →

Exploration