RNF207

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RNF207 mutation is significantly associated with the RNA expression of many other genes, with 216 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RNF207-associated genes across cancer lineages are DCD, ADIPOQ, and CGB2. Each is linked with RNF207 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF207-to-partner and partner-to-RNF207 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DCD grouped by RNF207-low versus RNF207-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF207→partner) and Y-score (partner→RNF207) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINDCD →+0.068+4.977.001.00731
LUNG_NSCLC_LUADADIPOQ →+0.022+5.228<.001.00531
BLOOD_LeukemiaCGB2 →+1.303+4.234<.001.00331
BLOOD_LeukemiaCRYGD →+2.159+4.234<.001.00331
BLOOD_LeukemiaOR4K2 →+0.025+4.384<.001.00631
BLOOD_LeukemiaMBD3L1 →+0.013+4.384<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 216 associations by consensus.

DCD by RNF207 expression — SKIN

Box plot of DCD in RNF207-low vs RNF207-high samples in SKIN.

Explore this box plot interactively →

Exploration