RNF19A

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF19A mutation is significantly associated with the total protein of many other genes, with 45 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF19A-associated genes across cancer lineages are EGFR_pY1068, ERK2, and INPP4B. Each is linked with RNF19A in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF19A-to-partner and partner-to-RNF19A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by RNF19A-low versus RNF19A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF19A→partner) and Y-score (partner→RNF19A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.373-2.874<.001<.00132
UCECERK2 →+0.161+1.362.017.03732
UCECINPP4B →-0.255-2.000.025.02932
UCECMAPK_pT202_Y204 →-0.390-2.222.018.01032
UCECMEK1 →+0.307+1.906.017.01532
UCECShc_pY317 →-0.263-3.000<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

EGFR_pY1068 by RNF19A expression — UCEC

Box plot of EGFR_pY1068 in RNF19A-low vs RNF19A-high samples in UCEC.

Explore this box plot interactively →

Exploration