RNF17

Across TCGA patient cohorts, RNF17 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,678 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RNF17-associated GO terms across cancer lineages are Protein modification by small protein removal, RNA polymerase II preinitiation complex assembly, and Regulation of DNA repair. Each is linked with RNF17 in more than 13 cancer types. Because this analysis shows association rather than direction, both RNF17-to-partner and partner-to-RNF17 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein modification by small protein removal grouped by RNF17-low versus RNF17-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF17→partner) and Y-score (partner→RNF17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Protein modification by small protein removal →	+0.060	+0.215	<.001	<.001	3	14
STAD	RNA polymerase II preinitiation complex assembly →	+0.063	+0.241	<.001	<.001	3	14
STAD	Regulation of DNA repair →	+0.059	+0.227	<.001	<.001	3	14
STAD	snRNA metabolic process →	+0.063	+0.219	<.001	<.001	3	14
STAD	Peptidyl-lysine modification →	+0.058	+0.226	<.001	<.001	3	14
STAD	Peptidyl-lysine acetylation →	+0.058	+0.232	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,678 associations by consensus.

Protein modification by small protein removal by RNF17 expression — STAD

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