RNF17

Across TCGA cell cohorts, RNF17 RNA expression is significantly associated with the go_rna of many other GO terms, with 565 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible RNF17-associated GO terms across cancer lineages are Mitochondrial electron transport, NADH to ubiquinone, Specification of animal organ identity, and Aerobic electron transport chain. Each is linked with RNF17 in more than 3 cancer types. Because this analysis shows association rather than direction, both RNF17-to-partner and partner-to-RNF17 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitochondrial electron transport, NADH to ubiquinone grouped by RNF17-low versus RNF17-high in LARGE_INTESTINE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF17→partner) and Y-score (partner→RNF17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	Mitochondrial electron transport, NADH to ubiquinone →	+0.068	+0.019	.002	.001	2	4
BLOOD_Lymphoma	Specification of animal organ identity →	-0.522	-0.020	.009	.005	3	3
LARGE_INTESTINE	Aerobic electron transport chain →	+0.062	+0.018	.005	.003	2	4
OESOPHAGUS	Regulation of chondrocyte differentiation →	-0.136	-0.201	.003	.004	3	3
BLOOD_Leukemia	Regulation of stem cell population maintenance →	+0.071	+0.014	<.001	.005	2	4
UPPER_AERODIGESTIVE_TRACT	Smooth muscle contraction →	-0.100	-0.196	.009	.008	2	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 565 associations by consensus.

Mitochondrial electron transport, NADH to ubiquinone by RNF17 expression — LARGE_INTESTINE

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