RNF138

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF138 mutation is significantly associated with the RNA expression of many other genes, with 2,603 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF138-associated genes across cancer lineages are RN7SKP181, MIR1269A, and RNU6-1326P. Each is linked with RNF138 in more than 2 cancer types. Because this analysis shows association rather than direction, both RNF138-to-partner and partner-to-RNF138 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SKP181 grouped by RNF138-low versus RNF138-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF138→partner) and Y-score (partner→RNF138) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SKP181 →+0.097+2.207<.001.00633
COADMIR1269A →+0.373+5.251<.001.00332
STADRNU6-1326P →+0.351+5.928<.001.00232
STADMIR548M →+0.661+5.463<.001.00532
STADTSPY20P →+0.128+5.928.008.00232
UCECRNU6-871P →+0.278+3.132<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,603 associations by consensus.

RN7SKP181 by RNF138 expression — UCEC

Box plot of RN7SKP181 in RNF138-low vs RNF138-high samples in UCEC.

Explore this box plot interactively →

Exploration