RNF130

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNF130 mutation is significantly associated with the RNA expression of many other genes, with 1,073 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RNF130-associated genes across cancer lineages are OR9Q2, ZNF725P, and SCP2D1. Each is linked with RNF130 in more than 1 cancer types. Because this analysis shows association rather than direction, both RNF130-to-partner and partner-to-RNF130 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR9Q2 grouped by RNF130-low versus RNF130-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RNF130→partner) and Y-score (partner→RNF130) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADOR9Q2 →+0.057+5.136<.001.00232
COADZNF725P →+0.104+3.831.003.00732
HNSCSCP2D1 →+0.067+5.221<.001.00332
HNSCSNORD66 →+0.767+4.565<.001.00432
UCECRNU6-7 →+0.368+2.076<.001.00132
UCECRNA5SP77 →+0.588+1.838<.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,073 associations by consensus.

OR9Q2 by RNF130 expression — COAD

Box plot of OR9Q2 in RNF130-low vs RNF130-high samples in COAD.

Explore this box plot interactively →

Exploration