RNASEK-C17orf49

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNASEK-C17orf49 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,024 significant associations in total. PRAD shows the largest number of these associations.

The most reproducible RNASEK-C17orf49-associated GO terms across cancer lineages are Tail-anchored membrane protein insertion into ER membrane, Protein insertion into ER membrane by stop-transfer membrane-anchor sequence, and Mitochondrial proton-transporting ATP synthase complex assembly. Each is linked with RNASEK-C17orf49 in more than 21 cancer types. Because this analysis shows association rather than direction, both RNASEK-C17orf49-to-partner and partner-to-RNASEK-C17orf49 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Tail-anchored membrane protein insertion into ER membrane grouped by RNASEK-C17orf49-low versus RNASEK-C17orf49-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RNASEK-C17orf49→partner) and Y-score (partner→RNASEK-C17orf49) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCATail-anchored membrane protein insertion into ER membrane →+0.052+0.180.001<.001222
READProtein insertion into ER membrane by stop-transfer membrane-anchor sequence →+0.036+0.268<.001<.001321
DLBCMitochondrial proton-transporting ATP synthase complex assembly →+0.053+0.366.004.004121
ACCLysosomal lumen acidification →+0.052+0.355<.001.001217
DLBCProton-transporting two-sector ATPase complex assembly →+0.058+0.445<.001<.001118
UCSProtein histidyl modification to diphthamide →+0.057+0.391.004.006118
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,024 associations by consensus.

Tail-anchored membrane protein insertion into ER membrane by RNASEK-C17orf49 expression — ESCA

Box plot of Tail-anchored membrane protein insertion into ER membrane in RNASEK-C17orf49-low vs RNASEK-C17orf49-high samples in ESCA.

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Exploration