RNA5SP288

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA5SP288 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,049 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RNA5SP288-associated proteins across cancer lineages are THOP1_S16, RSF1_S1282, and FAM122B_S119. Each is linked with RNA5SP288 in more than 2 cancer types. Because this analysis shows association rather than direction, both RNA5SP288-to-partner and partner-to-RNA5SP288 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RNA5SP288 versus THOP1_S16 in LSCC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RNA5SP288→partner) and Y-score (partner→RNA5SP288) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTHOP1_S16 →+0.442+1.152<.001<.00133
LSCCRSF1_S1282 →+0.714+0.783.003.00233
LSCCFAM122B_S119 →+0.558+0.760.001.00133
LSCCSPIN1 →+0.332+0.859<.001<.00133
HNSCBRD3_S563 →+0.505+1.030.003.00133
LSCCPHF6_S204 →+0.968+0.854<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,049 associations by consensus.

RNA5SP288 vs THOP1_S16 — LSCC

Per-sample scatter of RNA5SP288 vs THOP1_S16 in LSCC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration