RN7SL403P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SL403P RNA expression is significantly associated with the protein abundance of many other proteins, with 7,603 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RN7SL403P-associated proteins across cancer lineages are ILF2, DDX39B, and HNRNPLL. Each is linked with RN7SL403P in more than 3 cancer types. Because this analysis shows association rather than direction, both RN7SL403P-to-partner and partner-to-RN7SL403P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SL403P versus ILF2 in LSCC, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SL403P→partner) and Y-score (partner→RN7SL403P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCILF2 →+0.255+0.390<.001<.00134
GBMDDX39B →+0.254+0.438<.001.00234
GBMHNRNPLL →+0.331+0.658<.001<.00134
LSCCRFX1 →+0.197+0.454.002.00134
GBMKDM1A →+0.286+0.377.001.00134
GBMNIPBL_T2667 →+0.426+0.289.003.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,603 associations by consensus.

RN7SL403P vs ILF2 — LSCC

Per-sample scatter of RN7SL403P vs ILF2 in LSCC (Pearson r = 0.45).

Explore this scatter interactively →

Exploration