RN7SKP55

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP55 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,461 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RN7SKP55-associated proteins across cancer lineages are TMEM109, TMEM245, and TOMM70_S91. Each is linked with RN7SKP55 in more than 1 cancer types. Because this analysis shows association rather than direction, both RN7SKP55-to-partner and partner-to-RN7SKP55 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP55→partner) and Y-score (partner→RN7SKP55) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTMEM109 →+0.387+1.140.004.00632
HNSCTMEM245 →+0.435+1.267.003.00432
UCECTOMM70_S91 →+0.308+1.148.003.00432
CCRCCIGHG4 →-0.688-0.473.001.00232
LSCCKMT2D_S3986 →-0.580-0.824<.001<.00132
LSCCMAST4_S922 →-1.292-0.962.007.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,461 associations by consensus.

Exploration