RN7SKP249

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP249 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,538 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RN7SKP249-associated proteins across cancer lineages are CCDC186, ZHX1_S47, and ZHX1_S48. Each is linked with RN7SKP249 in more than 2 cancer types. Because this analysis shows association rather than direction, both RN7SKP249-to-partner and partner-to-RN7SKP249 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP249→partner) and Y-score (partner→RN7SKP249) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCCDC186 →-0.246-0.260.001<.00133
LSCCZHX1_S47 →+0.640+0.288<.001.00532
LSCCZHX1_S48 →+0.640+0.288<.001.00532
BRCASPINDOC_S308 →+0.474+0.282.001.00723
LSCCMYO19 →+0.311+0.283.001.00132
LSCCARAP1 →-0.225-0.214<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,538 associations by consensus.

Exploration