RN7SKP21

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RN7SKP21 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,809 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RN7SKP21-associated proteins across cancer lineages are S1PR1, SELENBP1, and SLC34A2. Each is linked with RN7SKP21 in more than 2 cancer types. Because this analysis shows association rather than direction, both RN7SKP21-to-partner and partner-to-RN7SKP21 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RN7SKP21 versus S1PR1 in GBM, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RN7SKP21→partner) and Y-score (partner→RN7SKP21) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMS1PR1 →+0.671+1.043.003.00432
LUADSELENBP1 →+0.572+0.846<.001<.00132
LUADSLC34A2 →+0.993+1.372<.001<.00132
LUADSLC4A1AP_S82 →-1.415-1.439.006.00232
LUADITGA6 →-0.710-1.338<.001<.00132
GBMKCTD16_T341 →+1.161+2.628<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,809 associations by consensus.

RN7SKP21 vs S1PR1 — GBM

Per-sample scatter of RN7SKP21 vs S1PR1 in GBM (Pearson r = 0.43).

Explore this scatter interactively →

Exploration