RIPK4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RIPK4 protein abundance is significantly associated with the RNA expression of many other genes, with 1,933 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible RIPK4-associated genes across cancer lineages are INAVA, RHOBTB3, and LINC02196. Each is linked with RIPK4 in more than 1 cancer types. Because this analysis shows association rather than direction, both RIPK4-to-partner and partner-to-RIPK4 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RIPK4→partner) and Y-score (partner→RIPK4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECINAVA →+0.777+0.267.005.00132
UCECRHOBTB3 →-0.907-0.216.002.00132
CCRCCLINC02196 →-0.316-0.209.001.00232
HNSCCD83 →-1.091-0.435<.001.00432
HNSCCEMIP2 →-0.773-0.415.001.00132
HNSCACAA2 →-0.965-0.514.003.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,933 associations by consensus.

Exploration