RIN1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RIN1 mutation is significantly associated with the total protein of many other genes, with 14 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RIN1-associated genes across cancer lineages are IGFBP2, MEK1, and p62 Lck ligand. Each is linked with RIN1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RIN1-to-partner and partner-to-RIN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IGFBP2 grouped by RIN1-low versus RIN1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RIN1→partner) and Y-score (partner→RIN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECIGFBP2 →-0.870-2.906<.001.00131
UCECMEK1 →+0.452+3.000<.001<.00131
UCECp62 Lck ligand →+0.355+2.232.003.00531
UCECP-Cadherin →-0.112-1.990.038.03031
UCECRad50 →-0.320-2.169<.001.00331
UCECAnnexin-1 →+0.454+2.479.021.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

IGFBP2 by RIN1 expression — UCEC

Box plot of IGFBP2 in RIN1-low vs RIN1-high samples in UCEC.

Explore this box plot interactively →

Exploration