RIMKLA

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RIMKLA RNA expression is significantly associated with the go_rna of many other GO terms, with 3,505 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible RIMKLA-associated GO terms across cancer lineages are Positive regulation of complement activation, Regulation of glycogen metabolic process, and Formation of primary germ layer. Each is linked with RIMKLA in more than 7 cancer types. Because this analysis shows association rather than direction, both RIMKLA-to-partner and partner-to-RIMKLA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of complement activation grouped by RIMKLA-low versus RIMKLA-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RIMKLA→partner) and Y-score (partner→RIMKLA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTPositive regulation of complement activation →-1.816-0.913<.001.00138
LUNG_SCLCRegulation of glycogen metabolic process →+0.062+1.425.001.00338
LUNG_SCLCFormation of primary germ layer →-0.053-1.035.003.00638
LUNG_SCLCTetrahydrobiopterin biosynthetic process →+0.172+2.046<.001<.00137
URINARY_TRACTPositive regulation of glycogen metabolic process →+0.073+0.685.003.00837
LARGE_INTESTINECopper ion export →-0.185-0.721<.001.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,505 associations by consensus.

Positive regulation of complement activation by RIMKLA expression — BREAST

Box plot of Positive regulation of complement activation in RIMKLA-low vs RIMKLA-high samples in BREAST.

Explore this box plot interactively →

Exploration