RHOB

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RHOB mutation is significantly associated with the RNA expression of many other genes, with 476 significant associations in total. BLCA shows the largest number of these associations.

The most reproducible RHOB-associated genes across cancer lineages are GPX6, MIR4265, and RNU6-254P. Each is linked with RHOB in more than 1 cancer types. Because this analysis shows association rather than direction, both RHOB-to-partner and partner-to-RHOB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GPX6 grouped by RHOB-low versus RHOB-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RHOB→partner) and Y-score (partner→RHOB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAGPX6 →+0.380+2.004<.001.00132
SKCMMIR4265 →+0.319+5.900<.001<.00132
UCECRNU6-254P →+0.350+3.039.003.00132
UCECPPP1R9A-AS1 →+0.227+3.902.002<.00132
BLCAPLLP →+0.898+2.509<.001.00131
BLCAUSP31 →+0.656+2.021<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 476 associations by consensus.

GPX6 by RHOB expression — BLCA

Box plot of GPX6 in RHOB-low vs RHOB-high samples in BLCA.

Explore this box plot interactively →

Exploration