RGS12

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RGS12 mutation is significantly associated with the RNA expression of many other genes, with 5,480 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RGS12-associated genes across cancer lineages are CHAF1B, NCAPH2, and UBE2M. Each is linked with RGS12 in more than 4 cancer types. Because this analysis shows association rather than direction, both RGS12-to-partner and partner-to-RGS12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CHAF1B grouped by RGS12-low versus RGS12-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RGS12→partner) and Y-score (partner→RGS12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCHAF1B →+0.502+1.514<.001<.00135
COADNCAPH2 →+0.564+3.624<.001.00135
LUADUBE2M →+0.491+3.530<.001.00235
COADCENPX →+0.667+2.906<.001.00135
UCECFOXM1 →+0.531+1.678.002<.00135
UCECHROB →+0.440+1.678<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,480 associations by consensus.

CHAF1B by RGS12 expression — UCEC

Box plot of CHAF1B in RGS12-low vs RGS12-high samples in UCEC.

Explore this box plot interactively →

Exploration