RGPD6

Across TCGA patient cohorts, RGPD6 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,425 significant associations in total. STAD shows the largest number of these associations.

The most reproducible RGPD6-associated GO terms across cancer lineages are Vacuolar transport, Lysosomal transport, and Positive regulation of mRNA metabolic process. Each is linked with RGPD6 in more than 22 cancer types. Because this analysis shows association rather than direction, both RGPD6-to-partner and partner-to-RGPD6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Vacuolar transport grouped by RGPD6-low versus RGPD6-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RGPD6→partner) and Y-score (partner→RGPD6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Vacuolar transport →	+0.057	+0.027	<.001	<.001	3	23
STAD	Lysosomal transport →	+0.056	+0.027	<.001	<.001	3	23
STAD	Positive regulation of mRNA metabolic process →	+0.048	+0.024	<.001	<.001	3	23
STAD	Nuclear-transcribed mRNA poly(A) tail shortening →	+0.061	+0.025	<.001	<.001	3	23
STAD	Postsynapse organization →	+0.032	+0.022	<.001	<.001	3	22
STAD	Establishment of protein localization to vacuole →	+0.056	+0.020	<.001	<.001	3	22

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,425 associations by consensus.

Vacuolar transport by RGPD6 expression — STAD

Explore this box plot interactively →