RGPD6

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RGPD6 protein abundance is significantly associated with the go_rna of many other GO terms, with 316 significant associations in total. BONE shows the largest number of these associations.

The most reproducible RGPD6-associated GO terms across cancer lineages are Negative regulation of striated muscle cell apoptotic process, Polyol transmembrane transport, and Regulation of excitatory synapse assembly. Each is linked with RGPD6 in more than 1 cancer types. Because this analysis shows association rather than direction, both RGPD6-to-partner and partner-to-RGPD6 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RGPD6→partner) and Y-score (partner→RGPD6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADNegative regulation of striated muscle cell apoptotic process →+0.134+2.065.005<.00132
LUNG_NSCLC_LUADPolyol transmembrane transport →+1.342+2.028.003<.00132
LUNG_NSCLC_LUADRegulation of excitatory synapse assembly →+0.159+2.347<.001.00132
LUNG_NSCLC_LUADB cell proliferation →+0.279+1.962<.001<.00132
LARGE_INTESTINEMaintenance of organelle location →+0.046+1.133.003.00132
OESOPHAGUSPositive regulation of endoplasmic reticulum tubular network organization →-0.154-1.330.007.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 316 associations by consensus.

Exploration