Across TCGA cell cohorts, RGPD4 mutation is significantly associated with the RNA expression of many other genes, with 52 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RGPD4-associated genes across cancer lineages are OR56A4, CCER1, and MAGEB1. Each is linked with RGPD4 in more than 2 cancer types. Because this analysis shows association rather than direction, both RGPD4-to-partner and partner-to-RGPD4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RGPD4→partner) and Y-score (partner→RGPD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUAD	OR56A4 →	+0.125	+3.777	<.001	<.001	3	3
LARGE_INTESTINE	CCER1 →	+0.007	+2.977	<.001	.006	3	2
LARGE_INTESTINE	MAGEB1 →	+0.155	+2.556	<.001	.006	3	2
SKIN	MYOD1 →	+0.056	+3.029	.004	.002	3	2
LUNG_NSCLC_LUAD	OR56A1 →	+0.223	+3.189	.001	.007	3	2
LARGE_INTESTINE	SLC5A5 →	+0.322	+2.822	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 52 associations by consensus.

Exploration

RGPD4 survival (RNA) · tumor vs normal (RNA) · all RGPD4 data types