RGPD4-AS1

Across TCGA patient cohorts, RGPD4-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 2,223 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RGPD4-AS1-associated proteins across cancer lineages are SNIP1, SRRT_S67, and TBC1D20. Each is linked with RGPD4-AS1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RGPD4-AS1-to-partner and partner-to-RGPD4-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RGPD4-AS1 versus SNIP1 in BRCA, with a Pearson correlation of 0.28.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RGPD4-AS1→partner) and Y-score (partner→RGPD4-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	SNIP1 →	+0.318	+0.010	.001	.004	3	2
LUAD	SRRT_S67 →	+0.248	+0.030	.008	.001	3	2
BRCA	TBC1D20 →	-0.382	-0.011	.001	.006	3	2
BRCA	TUT4_S104 →	+0.670	+0.016	.007	.004	3	2
BRCA	MRTO4 →	+0.346	+0.012	.009	.005	3	2
BRCA	LEMD2_S499 →	-0.819	-0.015	.001	.009	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,223 associations by consensus.

RGPD4-AS1 vs SNIP1 — BRCA

Explore this scatter interactively →