RGP1

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, RGP1 mass-spec protein is linked to patient survival in 4 of 34 cancer types, making it a survival-associated RGP1 data layer compared with 28 for mass-spec protein and 6 for mutation status.

The strongest signal is observed in pancreatic ductal adenocarcinoma (PDAC), where higher RGP1 mass-spec protein is associated with worse disease-free survival. In most high-consensus cancer types, elevated RGP1 expression acts as an unfavorable survival marker, although some lineages such as HNSC and LUAD show a favorable association.

PDAC, HNSC, and LSCC are the cancer types where RGP1 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
PDACDFSMedianAll0.1960.389.00332view →
HNSCOSMedianAll1.0000.479.04912view →
LSCCDFSQuartileII,III,IV0.7100.963.0138view →
LUADDFSMedianII,III,IV0.9030.787.0266view →
Pink = unfavorable, green = favorable. Showing the 4 strongest of 4 lineages.

RGP1–PDAC (DFS)

Kaplan–Meier survival curve for RGP1 mass-spec protein-high vs -low samples in PDAC.

Open the PDAC breakdown →

Exploration