RFPL4B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RFPL4B mutation is significantly associated with the RNA expression of many other genes, with 10 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible RFPL4B-associated genes across cancer lineages are OBP2B, NPSR1, and KRTAP12-3. Each is linked with RFPL4B in more than 1 cancer types. Because this analysis shows association rather than direction, both RFPL4B-to-partner and partner-to-RFPL4B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OBP2B grouped by RFPL4B-low versus RFPL4B-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RFPL4B→partner) and Y-score (partner→RFPL4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaOBP2B →+0.057+5.269<.001<.00131
BLOOD_LeukemiaNPSR1 →+0.033+4.152<.001.00931
BLOOD_LeukemiaKRTAP12-3 →+0.092+4.539<.001.00731
SKINGOLGA8F →+0.019+3.217<.001.00631
SKINSMIM43 →+0.531+3.426<.001.00731
SKINOPRPN →+0.037+4.047<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

OBP2B by RFPL4B expression — BLOOD_Leukemia

Box plot of OBP2B in RFPL4B-low vs RFPL4B-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration