RDH11

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RDH11 protein abundance is significantly associated with the RNA expression of many other genes, with 8,877 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RDH11-associated genes across cancer lineages are VTI1B, ERG28, and ATP6V1D. Each is linked with RDH11 in more than 7 cancer types. Because this analysis shows association rather than direction, both RDH11-to-partner and partner-to-RDH11 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RDH11 versus VTI1B in HNSC, with a Pearson correlation of 0.23.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RDH11→partner) and Y-score (partner→RDH11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCVTI1B →+0.456+0.218.002.00138
OVERG28 →+0.735+0.517<.001<.00137
COADATP6V1D →+0.592+0.275<.001<.00136
OVPIGH →+0.570+0.442.001<.00136
LUADEIF2B2 →+0.530+0.405<.001.00136
HNSCACTR10 →+0.548+0.321.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,877 associations by consensus.

RDH11 vs VTI1B — HNSC

Per-sample scatter of RDH11 vs VTI1B in HNSC (Pearson r = 0.23).

Explore this scatter interactively →

Exploration