RCE1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RCE1 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,740 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible RCE1-associated GO terms across cancer lineages are CAAX-box protein processing, Metaphase/anaphase transition of mitotic cell cycle, and Regulation of attachment of mitotic spindle microtubules to kinetochore. Each is linked with RCE1 in more than 19 cancer types. Because this analysis shows association rather than direction, both RCE1-to-partner and partner-to-RCE1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CAAX-box protein processing grouped by RCE1-low versus RCE1-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (RCE1→partner) and Y-score (partner→RCE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONECAAX-box protein processing →+0.178+1.199<.001<.001320
BONEMetaphase/anaphase transition of mitotic cell cycle →+0.195+0.828<.001<.001312
LUNG_NSCLC_LUSCRegulation of attachment of mitotic spindle microtubules to kinetochore →+0.177+0.712<.001.001312
BREASTPositive regulation of attachment of mitotic spindle microtubules to kinetochore →+0.213+0.893<.001.001312
BONEMetaphase/anaphase transition of cell cycle →+0.196+0.934<.001<.001312
BONERegulation of mRNA processing →+0.077+1.157.005<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,740 associations by consensus.

CAAX-box protein processing by RCE1 expression — BONE

Box plot of CAAX-box protein processing in RCE1-low vs RCE1-high samples in BONE.

Explore this box plot interactively →

Exploration