RCE1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RCE1 protein abundance is significantly associated with the RNA expression of many other genes, with 3,378 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible RCE1-associated genes across cancer lineages are CTSD, EPAS1, and NCEH1. Each is linked with RCE1 in more than 6 cancer types. Because this analysis shows association rather than direction, both RCE1-to-partner and partner-to-RCE1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RCE1 versus CTSD in BREAST, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RCE1→partner) and Y-score (partner→RCE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTCTSD →-1.566-0.345.002<.00137
BONEEPAS1 →-4.865-0.485.003.00837
BONENCEH1 →-2.562-0.480.004.00136
BLOOD_LeukemiaCAPN2 →-1.927-0.254.002.00136
UPPER_AERODIGESTIVE_TRACTMGAT1 →-1.165-0.525<.001.00136
BONESF3A2 →+0.674+0.348<.001.00336
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,378 associations by consensus.

RCE1 vs CTSD — BREAST

Per-sample scatter of RCE1 vs CTSD in BREAST (Pearson r = -0.37).

Explore this scatter interactively →

Exploration