RBSN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RBSN protein abundance is significantly associated with the RNA expression of many other genes, with 4,982 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible RBSN-associated genes across cancer lineages are RANBP1, RNF126, and HIRA. Each is linked with RBSN in more than 10 cancer types. Because this analysis shows association rather than direction, both RBSN-to-partner and partner-to-RBSN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RBSN versus RANBP1 in LIVER, with a Pearson correlation of 0.78.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBSN→partner) and Y-score (partner→RBSN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERRANBP1 →+1.145+2.224.001.001211
SOFT_TISSUERNF126 →+1.025+1.443.001.00139
OVARYHIRA →+1.004+1.851.002.00438
OVARYHDHD5 →+1.339+1.635<.001.00238
SKINTOMM22 →+0.578+1.918.002<.00138
SKINCDC45 →+0.902+1.271.007.00738
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,982 associations by consensus.

RBSN vs RANBP1 — LIVER

Per-sample scatter of RBSN vs RANBP1 in LIVER (Pearson r = 0.78).

Explore this scatter interactively →

Exploration