RBPMS

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RBPMS mutation is significantly associated with the total protein of many other genes, with 28 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RBPMS-associated genes across cancer lineages are eEF2, eIF4G, and FOXO3a_pS318_S321. Each is linked with RBPMS in more than 1 cancer types. Because this analysis shows association rather than direction, both RBPMS-to-partner and partner-to-RBPMS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by RBPMS-low versus RBPMS-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBPMS→partner) and Y-score (partner→RBPMS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.458+2.321.010.03531
UCECeIF4G →+0.375+2.321.016.03531
UCECFOXO3a_pS318_S321 →-0.166-2.321.008.03531
UCECGAPDH →+0.648+2.999.016.03531
UCECJNK_pT183_Y185 →-0.212-2.308.012.03631
UCECKu80 →+0.257+2.335.030.02031
Each partner links to its Q-omics profile. Showing the 6 strongest of 28 associations by consensus.

eEF2 by RBPMS expression — UCEC

Box plot of eEF2 in RBPMS-low vs RBPMS-high samples in UCEC.

Explore this box plot interactively →

Exploration