RBMS3-AS3

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RBMS3-AS3 RNA differs between tumor and matched normal tissue in 15 of 18 cancer types tested, making tumor–normal expression one of RBMS3-AS3’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where RBMS3-AS3 RNA is repressed in tumor relative to normal tissue. In most cancer types RBMS3-AS3 is over-expressed in tumor, although a few such as COAD and KICH show the opposite, repressed pattern.

COAD, KICH, and BLCA are the cancer types where RBMS3-AS3 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RBMS3-AS3 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADMaleII,III,IV−0.724<.00111view →
KICHFemaleAll−1.417<.0019view →
BLCAMaleIV−1.772<.0018view →
LUSCAllIII,IV−1.483<.0018view →
UCECAllAll−1.305<.0018view →
THCAAllAll−0.593<.0018view →
STADAllAll−0.832<.0017view →
KIRCAllII,III,IV−0.360<.0017view →
LIHCMaleAll−0.309<.0017view →
BRCAAllAll−1.372<.0016view →
LUADFemaleIII,IV−1.154<.0016view →
READAllAll−1.086<.0015view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 15 lineages.

RBMS3-AS3–COAD

Tumor-vs-normal expression box plot for RBMS3-AS3 RNA in COAD.

Open the COAD breakdown →

Exploration