RBM5-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RBM5-AS1 RNA differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of RBM5-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where RBM5-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types RBM5-AS1 is over-expressed in tumor, although a few such as THCA and BRCA show the opposite, repressed pattern.

THCA, BLCA, and BRCA are the cancer types where RBM5-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RBM5-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAAllAll−0.238.0016view →
BLCAFemaleAll+0.221.0144view →
BRCAFemaleAll−0.169.0114view →
LIHCFemaleAll+0.138<.0014view →
LUSCAllAll−0.169.0072view →
CHOLAllAll+0.295.0211view →
STADAllII,III,IV+0.222.0461view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

RBM5-AS1–THCA

Tumor-vs-normal expression box plot for RBM5-AS1 RNA in THCA.

Open the THCA breakdown →

Exploration