RBM47

Across TCGA cell cohorts, RBM47 mutation is significantly associated with the RNA expression of many other genes, with 695 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RBM47-associated genes across cancer lineages are LINGO4, BPIFB6, and CCDC105. Each is linked with RBM47 in more than 1 cancer types. Because this analysis shows association rather than direction, both RBM47-to-partner and partner-to-RBM47 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINGO4 grouped by RBM47-low versus RBM47-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBM47→partner) and Y-score (partner→RBM47) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	LINGO4 →	+0.121	+3.132	<.001	.001	3	2
LUNG_SCLC	BPIFB6 →	+0.012	+5.029	.001	.006	3	2
PANCREAS	CCDC105 →	+0.013	+5.614	<.001	.002	3	1
PANCREAS	TFDP3 →	+0.013	+5.000	<.001	.006	3	1
PANCREAS	LCE2A →	+0.033	+5.614	<.001	.002	3	1
PANCREAS	OR2J1 →	+0.006	+5.614	<.001	.002	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 695 associations by consensus.

LINGO4 by RBM47 expression — LARGE_INTESTINE

Explore this box plot interactively →