RBFOX1

Across TCGA patient cohorts, RBFOX1 protein abundance is significantly associated with the RNA expression of many other genes, with 3,987 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RBFOX1-associated genes across cancer lineages are YPEL1, SNRPD3, and PRODH. Each is linked with RBFOX1 in more than 1 cancer types. Because this analysis shows association rather than direction, both RBFOX1-to-partner and partner-to-RBFOX1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RBFOX1 versus YPEL1 in GBM, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBFOX1→partner) and Y-score (partner→RBFOX1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	YPEL1 →	+0.608	+0.727	.005	.006	3	1
GBM	SNRPD3 →	+0.412	+0.619	.002	.008	3	1
GBM	PRODH →	+0.939	+0.861	<.001	<.001	3	1
GBM	SEZ6L →	+1.724	+0.862	<.001	<.001	3	1
GBM	POLR2F →	+0.407	+0.607	.005	.003	3	1
GBM	SEPTIN3 →	+1.228	+0.737	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,987 associations by consensus.

RBFOX1 vs YPEL1 — GBM

Explore this scatter interactively →