RBBP6

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RBBP6 mutation is significantly associated with the total protein of many other genes, with 43 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RBBP6-associated genes across cancer lineages are c-Kit, Caspase-7-cleavedD198, and TFRC. Each is linked with RBBP6 in more than 4 cancer types. Because this analysis shows association rather than direction, both RBBP6-to-partner and partner-to-RBBP6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, c-Kit grouped by RBBP6-low versus RBBP6-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RBBP6→partner) and Y-score (partner→RBBP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMc-Kit →-0.483-1.874.048.04935
UCECCaspase-7-cleavedD198 →+0.416+1.309.009.01335
UCECTFRC →+0.452+1.459.001.00133
UCECC-Raf →+0.149+1.584<.001.00433
UCECCyclin-B1 →+0.488+1.736.001.00533
LUSC4E-BP1_pT70 →+0.305+3.009.005.01923
Each partner links to its Q-omics profile. Showing the 6 strongest of 43 associations by consensus.

c-Kit by RBBP6 expression — SKCM

Box plot of c-Kit in RBBP6-low vs RBBP6-high samples in SKCM.

Explore this box plot interactively →

Exploration