RB1-DT

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RB1-DT RNA differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of RB1-DT’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where RB1-DT RNA is repressed in tumor relative to normal tissue. In most cancer types RB1-DT is over-expressed in tumor, although a few such as THCA and KICH show the opposite, repressed pattern.

THCA, KICH, and BRCA are the cancer types where RB1-DT tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RB1-DT RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAMaleAll−0.438<.0018view →
KICHFemaleII,III,IV−0.682<.0017view →
BRCAFemaleII,III,IV−0.254<.0016view →
COADMaleAll+0.197.0076view →
STADAllAll+0.237.0084view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

RB1-DT–THCA

Tumor-vs-normal expression box plot for RB1-DT RNA in THCA.

Open the THCA breakdown →

Exploration