RANBP6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RANBP6 mutation is significantly associated with the RNA expression of many other genes, with 3,914 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RANBP6-associated genes across cancer lineages are MTA2, CENPU, and MAD2L1. Each is linked with RANBP6 in more than 2 cancer types. Because this analysis shows association rather than direction, both RANBP6-to-partner and partner-to-RANBP6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MTA2 grouped by RANBP6-low versus RANBP6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RANBP6→partner) and Y-score (partner→RANBP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMTA2 →+0.446+2.108<.001<.00133
UCECCENPU →+0.673+2.076<.001<.00133
UCECMAD2L1 →+0.612+1.468<.001.00133
UCECMETTL17 →+0.251+3.010.007<.00133
UCECCHAF1A →+0.807+3.684<.001<.00133
UCECMAP2K1 →+0.470+1.653<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,914 associations by consensus.

MTA2 by RANBP6 expression — UCEC

Box plot of MTA2 in RANBP6-low vs RANBP6-high samples in UCEC.

Explore this box plot interactively →

Exploration