RANBP3

Across TCGA patient cohorts, RANBP3 RNA expression is significantly associated with the mutation status of many other genes, with 13,013 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RANBP3-associated genes across cancer lineages are TP53, ZNF536, and LRRK2. Each is linked with RANBP3 in more than 2 cancer types. Because this analysis shows association rather than direction, both RANBP3-to-partner and partner-to-RANBP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TP53 grouped by RANBP3-low versus RANBP3-high in LIHC.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RANBP3→partner) and Y-score (partner→RANBP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIHC	TP53 →	+1.315	+0.224	.001	<.001	3	3
READ	ZNF536 →	+2.477	+0.316	.009	.004	3	3
HNSC	LRRK2 →	+2.619	+0.293	.005	.007	3	3
UCEC	KCNH7 →	+1.862	+0.361	<.001	<.001	3	3
UCEC	CCDC88A →	+1.823	+0.374	<.001	<.001	3	3
UCEC	CR2 →	+2.478	+0.408	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,013 associations by consensus.

TP53 by RANBP3 expression — LIHC

Explore this box plot interactively →