RANBP2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RANBP2 mutation is significantly associated with the RNA expression of many other genes, with 7,665 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RANBP2-associated genes across cancer lineages are RANBP1, RCC1, and UQCRC1. Each is linked with RANBP2 in more than 5 cancer types. Because this analysis shows association rather than direction, both RANBP2-to-partner and partner-to-RANBP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RANBP1 grouped by RANBP2-low versus RANBP2-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RANBP2→partner) and Y-score (partner→RANBP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCARANBP1 →+0.639+3.722.001<.00136
UCECRCC1 →+0.398+1.273<.001<.00136
UCECUQCRC1 →+0.304+1.764<.001<.00136
UCECUQCRH →+0.681+1.495<.001<.00136
UCECPOC1A →+0.414+2.099<.001<.00136
STADNDUFA8 →+0.407+3.207.002.00935
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,665 associations by consensus.

RANBP1 by RANBP2 expression — BLCA

Box plot of RANBP1 in RANBP2-low vs RANBP2-high samples in BLCA.

Explore this box plot interactively →

Exploration