RANBP10

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, RANBP10 mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RANBP10-associated genes across cancer lineages are OR2M3, OR10G2, and PRR23C. Each is linked with RANBP10 in more than 1 cancer types. Because this analysis shows association rather than direction, both RANBP10-to-partner and partner-to-RANBP10 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR2M3 grouped by RANBP10-low versus RANBP10-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RANBP10→partner) and Y-score (partner→RANBP10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSOR2M3 →+0.006+4.906<.001.00631
OESOPHAGUSOR10G2 →+0.033+4.906<.001.00631
KIDNEYPRR23C →+0.006+5.000<.001.00531
LARGE_INTESTINECIBAR2 →+0.325+4.688<.001<.00131
LARGE_INTESTINEFOLR2 →+0.074+3.716<.001.00831
LARGE_INTESTINEOR10W1 →+0.019+4.562<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

OR2M3 by RANBP10 expression — OESOPHAGUS

Box plot of OR2M3 in RANBP10-low vs RANBP10-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration