RAMAC

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAMAC mutation is significantly associated with the total protein of many other genes, with 19 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAMAC-associated genes across cancer lineages are EGFR_pY1068, A-Raf_pS299, and FOXO3a_pS318_S321. Each is linked with RAMAC in more than 1 cancer types. Because this analysis shows association rather than direction, both RAMAC-to-partner and partner-to-RAMAC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by RAMAC-low versus RAMAC-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAMAC→partner) and Y-score (partner→RAMAC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.254-3.584.036.00231
UCECA-Raf_pS299 →-0.136-2.321.018.03431
UCECFOXO3a_pS318_S321 →-0.141-3.160.019.01931
UCECJNK_pT183_Y185 →-0.221-2.999.006.03531
UCECMEK1 →+0.506+3.584.004.00231
UCECNotch1 →+0.234+3.009<.001.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

EGFR_pY1068 by RAMAC expression — UCEC

Box plot of EGFR_pY1068 in RAMAC-low vs RAMAC-high samples in UCEC.

Explore this box plot interactively →

Exploration