RALY

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RALY mutation is significantly associated with the immune_cell of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RALY-associated genes across cancer lineages are Eosinophils, HSC, and Macrophages M2. Each is linked with RALY in more than 1 cancer types. Because this analysis shows association rather than direction, both RALY-to-partner and partner-to-RALY results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Eosinophils grouped by RALY-low versus RALY-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RALY→partner) and Y-score (partner→RALY) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCEosinophils →+0.060+3.173<.001.04931
UCECHSC →+0.137+3.180.022.01022
UCECMacrophages M2 →+0.014+3.287.012.00821
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Eosinophils by RALY expression — LUSC

Box plot of Eosinophils in RALY-low vs RALY-high samples in LUSC.

Explore this box plot interactively →

Exploration