RAD51C

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAD51C mutation is significantly associated with the RNA expression of many other genes, with 322 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RAD51C-associated genes across cancer lineages are OR8B6P, MIR606, and NRON. Each is linked with RAD51C in more than 2 cancer types. Because this analysis shows association rather than direction, both RAD51C-to-partner and partner-to-RAD51C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR8B6P grouped by RAD51C-low versus RAD51C-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAD51C→partner) and Y-score (partner→RAD51C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAOR8B6P →+0.043+3.043<.001.00333
BLCAMIR606 →+0.298+3.043<.001.00332
LUSCNRON →+0.348+4.339<.001.00732
SKCMMIR4688 →+0.295+3.809<.001.00332
CESCFDX1P2 →+0.094+4.812<.001.00632
CESCCBX3P6 →+0.096+5.144<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 322 associations by consensus.

OR8B6P by RAD51C expression — BLCA

Box plot of OR8B6P in RAD51C-low vs RAD51C-high samples in BLCA.

Explore this box plot interactively →

Exploration